Category Archives: cluster

MMETSP re-assemblies

*** Update (9/27/2016): 719 assemblies now available at the links below. All FINISHED!!! *** Update (9/22/2016): 715 assemblies now available at the links below. I have *almost*¬†finished re-assembling de novo transcriptomes from the Marine Microbial Eukaryotic Transcriptome Sequencing Project (Keeling … Continue reading

Posted in Bioinformatics, cluster, Data Analyses, MMETSP, reproducibility, science | Leave a comment

How to install linux software without root privileges

HPC cluster users rarely have root privileges for installing new software. Default location for installation is usually /usr/bin/, but our user directories are usually located somewhere else like /home/ljcohen/ or /mnt/home/ljcohen/. So, what are you supposed to do when you … Continue reading

Posted in cluster, High Performance Computing, Linux, software | 2 Comments